odd postgresql performance (excessive lseek)

From: Jon Nelson <jnelson+pgsql(at)jamponi(dot)net>
To: pgsql-performance(at)postgresql(dot)org
Subject: odd postgresql performance (excessive lseek)
Date: 2010-10-14 20:00:32
Message-ID: AANLkTikS8ptnCVJK+6u-Z3Xh8WMKdgq+T+trdxt3xgYB@mail.gmail.com
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postgres 8.4.4 on openSUSE 11.3 (2.6.36rc7, x86_64).

I was watching a fairly large query run and observed that the disk
light went out. I checked 'top' and postgres was using 100% CPU so I
strace'd the running process.
This is what I saw:

lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(87, 0, SEEK_END) = 585531392
lseek(94, 270680064, SEEK_SET) = 270680064
read(94, "<elided>"..., 8192) = 8192

and I observed that pattern quite a bit.

I know lseek is cheap, but a superfluous systemcall is a superfluous
systemcall, and over a short period amounted to 37% (according to
strace) of the time spent in the system.

What's with the excess calls to lseek?

The query plan was a nested loop anti-join (on purpose).

--
Jon

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